CDS
| Accession Number | TCMCG066C33040 |
| gbkey | CDS |
| Protein Id | XP_034575188.1 |
| Location | complement(join(2936669..2936872,2936988..2937385,2937754..2937874,2937962..2938130,2938624..2938694,2938781..2938994,2939105..2939585,2939858..2939969,2940048..2940102,2940200..2940282,2940371..2940421,2941115..2941254,2941750..2941883,2942108..2942198,2942286..2942375,2942462..2942592,2942874..2942910,2943007..2943067,2943150..2943290)) |
| Gene | LOC117839055 |
| GeneID | 117839055 |
| Organism | Setaria viridis |
Protein
| Length | 927aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034719297.1 |
| Definition | RNA-binding protein 28 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGCAAGCGGAAGCAGCGCGGCGGCGGCGGCGGAGAACCCGCCGGGGAAGGCGAAGCGGCCACAGGCGGCACTGGAGGTGGGCACAGCCCGTCCACCGTGTTCGTCTCCAACCTGCCCTATACCTTCAAGTCCTCCGATCTCGAGGCGGTGTTTAGCGAGGTCGGCCCGGTGCGGCGTTGCTTCATGGTTGCGGAGAAAGGATCGGAGACGAGTCGAGGCTTTGGGTTCGTGCAATTCGCAACTGTTCAAGATGCTGAGCGAGCTATTCAACAAAAGAATGGATTTCCTGTTGCTGGTAGGAAAATCAGAGTTAAGCTAGCAATAAATCGTGCCCCACTGAAGGAACGCTTGCAAAAGAAAGAGAATATACAAGCAAAGGACTCTGATGCAAAAGATGAAGCAGATGATACTTCTGCTACTGTAAAGCATAAGGAGAGTTCCATTAAGGCAGATTCAGAGAAACCACAGCTGTTGGCAAAGGATGCTATGGTATCAAAGGAAGCTTCCATTGGTGACAGCGATAAAGTGAAAAGTTCTGAAAAGCAAAGGGTTGCAAAAACGGTGATTTTTGGTGGTCTGCCAGACTTTGCCATGGCCAGTGAGGTTTTCCGTCAAGCTGGAGAGATTGGTCCGGTTGTATCTGTAAACTATCCACTTCCCAAAGAGGAAATGGAACTCCATGGACTTGCTCGAGATGGATGCACATCAGATGCAGCAGCTGTACTCTTTGCAAGTGTCAAATCGGCTTGGGATTCTGTTGTCCGCCTACATCGTAAGGAAGTCAAGGGAGCAATTGTTTGGGCTCGCCAACTTGGAGGAGAGGGTTCAAAGATCAGGAAATGGCGAGTGATTGTCAGGAACCTGCCATTCAAGATTACAGAAAAGGAGATAATGGATATGTTCAGTTCAGCAGGGTTTGTCTGGGATGTGTCTATTCCTCATAAGTCTGATGAGGGGTTATCAAAAGGCTTTGCTTTTGTATCATTCACACGGAAGCAGGATGCAGAAAATGCTATAAAAAATATTAATGGAAAAGTTGTAGCTAAGAGACCGGTGGCTGTTGATTGGGCTGTTCCAAAAAAAGTATACACTGTTGCGGCAAAATCAGGTGCCGAGGATAATGAGCTTGCGAATGTACCTGACGATGGCAGTGATGATGACACCTCTGAAGAGAACCTTGTTGGAGAAGATGATAGCTCTGAACTTGATCAGGAGATTTCTAATCGTCCATCTGAGGATGATTTCAAAACTGAAGTAGATATTTCTAGAAAAGTTCTTGAAAATTTGATCAAGTCATCAGAGAAGTCTGAACCATCTGGTGTTGACGGTTCAGATATTGATACTGACACTGAAACAGAAAATGACACACCAGAAAAGAAGAAACCTGAGTCACCTGTAGCTGGCAAGTCGGCTAAGTCGAAACGTGTAACAGATGCAAAAATCACTGATCCTGCTTCCAAACCTGATAAAAAGGATACAGACCTGGATAGGACTATATTCATCAGCAACCTTCCTTTTGATATAAGTAACGAGGAGGTAACAAAGCGCTTCTCAGTTTTTGGGAAGGTTGAATCTTTCTTCCCGGTTCTTCATAAACTCACAAAGAGACCTAGAGGTACTGGTTTCCTGAAGTTTTCTACTGCAGAGGCAGCTGATGCAGCAGTTTCTGCCGCCAATGCTGCTCCTGGCTTAGGTATATTTATGAAGAGTAGGGCACTTAATGTTATGAAAGCAATGGACAAGGAGTCGGCTCACAAAAAGGCACTTGACAAGGCAAAAACTGAGGTTGAGGATAGACGGAATCTGTACTTGGCCAAGGAGGGTGAAATACTTGCTGGAACACCAGCTGCTGAAGGTGTGTCAGATGCTGACATGAATAAACGTAACTGGTTGGCTAGAAGGAAAGCGGAGATGCTTCAGTCTCCAAAGTTTCACGTGTCCAAAACAAGGCTTATCATCTACAATTTGCCTAAGACTATGACCATTAATGATGTAAAGAAGCTTTGCAGAGAAGCAGTCATTTCTCGTGCTACCAGACAAAATCCTGTCATCCGGAAGGTAAATATCCTGAAGAATGAAAAGAAAGGGGTACAGAAACATTCGCGTGGTGTAGCCTTTGTTGATTTTCAAGAACATGAGCACGCTCTTGTCGCTCTAAGAGTTCTAAACAACAACCCTGAAACCTTTGGTGCAGAACGGCGTCCAATTGTGGAGTTTGCTCTTGAGGATGTTGAAAAGGTTAGGCTTCAGAAGATTCGAATGGAACGCAATCGGAAGTCAGCAGCAGAAGCTGCAGAAAATCAGCAGAGTCCTTCAGGGGATCAACCTGCAGGCGATGGCAGTCATGCAGGTAGCAGAAGGACATTCAGAAAAGGTAACAAGCAGAGATCACATGATAGACCATCTAAACCATCCGATTCTGGCGAAGGGCCTGCCAAGGATCCTGTTGCTGGAGATCAAAGTGCTGTGGAAGGTGTAAGAAAGGGAAGACCTGCAAAGAGATCAAGGAAGTCAAATGAGGGTACCATTTTGGCGGATCGAGATCGAAAAGATGCAACCCCAATTGCTGCTGGGAATCAAGCTGTGTCGAGCGAGCATGATCAATCAGTTGCTCCCAAGAAAAGGAAAAACAGAAAAGACGGCCAGACAGAGCAAAAGAGAGGAAAGGCTACAAAAAGGACAAGGAAAGAACCTACCGGGGAAGGAGGCGTCGATAAGTCACTGGTGGAGCAGTATCGTTCCAAATTCTTGCAACATGGCGTGAGCAAAACCAAAGCGTAG |
| Protein: MGKRKQRGGGGGEPAGEGEAATGGTGGGHSPSTVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSETSRGFGFVQFATVQDAERAIQQKNGFPVAGRKIRVKLAINRAPLKERLQKKENIQAKDSDAKDEADDTSATVKHKESSIKADSEKPQLLAKDAMVSKEASIGDSDKVKSSEKQRVAKTVIFGGLPDFAMASEVFRQAGEIGPVVSVNYPLPKEEMELHGLARDGCTSDAAAVLFASVKSAWDSVVRLHRKEVKGAIVWARQLGGEGSKIRKWRVIVRNLPFKITEKEIMDMFSSAGFVWDVSIPHKSDEGLSKGFAFVSFTRKQDAENAIKNINGKVVAKRPVAVDWAVPKKVYTVAAKSGAEDNELANVPDDGSDDDTSEENLVGEDDSSELDQEISNRPSEDDFKTEVDISRKVLENLIKSSEKSEPSGVDGSDIDTDTETENDTPEKKKPESPVAGKSAKSKRVTDAKITDPASKPDKKDTDLDRTIFISNLPFDISNEEVTKRFSVFGKVESFFPVLHKLTKRPRGTGFLKFSTAEAADAAVSAANAAPGLGIFMKSRALNVMKAMDKESAHKKALDKAKTEVEDRRNLYLAKEGEILAGTPAAEGVSDADMNKRNWLARRKAEMLQSPKFHVSKTRLIIYNLPKTMTINDVKKLCREAVISRATRQNPVIRKVNILKNEKKGVQKHSRGVAFVDFQEHEHALVALRVLNNNPETFGAERRPIVEFALEDVEKVRLQKIRMERNRKSAAEAAENQQSPSGDQPAGDGSHAGSRRTFRKGNKQRSHDRPSKPSDSGEGPAKDPVAGDQSAVEGVRKGRPAKRSRKSNEGTILADRDRKDATPIAAGNQAVSSEHDQSVAPKKRKNRKDGQTEQKRGKATKRTRKEPTGEGGVDKSLVEQYRSKFLQHGVSKTKA |